GenomicReferenceSequence

A ReferenceSequence describing full or partial chromosomal DNA.

Scope and Usage

The individual characters of a GenomicReferenceSequence are the four DNA nucleotides: A,G,T,C. GenomicReferenceSequence is abstract. Instances are one of:


The purpose of this abstract class is to provide a target for GenomicReferenceCoordinate.

Exclusions and Limitations

In version 0.1, GenomicReferenceSequence must be primary assembly chromosome sequence. Patches, unplaced sequences, and other sequences of genomic DNA are unsupported in 1.0.

Attributes

No attributes beyond those inherited from ReferenceSequence