AlleleConservationScoreStatement

A statement describing a quantitative score of the degree of evolutionary conservation of an allele across a defined set of taxa/species

SEPIO:0000369
Descended from Statement

Scope and Usage

Attributes

Name Type Cardinality Description IRI Defined in
allele CanonicalAllele 1..1 The allele for which conservation values are given SEPIO:0000275 AlleleConservationScoreStatement
algorithm string 0..1 Method or program used to calculate conservation SEPIO:0000130 AlleleConservationScoreStatement
score number 0..1 Numerical score for the conservation of the allele SEPIO:0000168 AlleleConservationScoreStatement
label string 0..1 A name given to the resource. RDFS:label Entity
description string 0..1 Description may include but is not limited to: an abstract, a table of contents, a graphical representation, or a free-text account of the resource. DC:description Entity
userLabelDictionary UserLabel 0..* An optional label defined by the user. Used for custom entities or to clarify the preferred user label on existing entities with non-preferred labels. SEPIO:0000422 Statement
outcomeQualifier string 0..1 Use “NOT” as the value of this property to assert that the statement is negated. SEPIO:0000346 Statement
evidenceLine EvidenceLine 0..* supporting evidence SEPIO:0000006 Statement
contribution Contribution 0..* The contributions (agent, time and role) made to this entity SEPIO:0000159 Statement
source string 0..* A string indicating the source of a Statement DC:source Statement

Instances

ID label description userLabelDictionary outcomeQualifier evidenceLine allele algorithm score

CGEX:AllConservScore116

CAR:CA013536

phyloP

-0.76

CGEX:AllConservScore171

CAR:CA013536

PhastCons

0.63

CGEX:AllConservScore222

CAR:CA177682

phyloP

0.45

CGEX:AllConservScore224

CAR:CA177682

PhastCons

1.0

CGEX:AllConservScore226

CAR:CA013536

PhastCons

0.63

CGEX:AllConservScore228

CAR:CA501232

PhastCons

0.039

CGEX:AllConservScore230

CAR:CA013536

phyloP

-0.76

CGEX:AllConservScore245

CAR:CA501232

phyloP

-2.297