RegionTypeStatement

A statement that classifies a particular region of biological sequence as being of a specified type or types (e.g. using terms from the Sequence Ontology).

SEPIO:0000243
Descended from Statement

Scope and Usage

Attributes

Name Type Cardinality Description IRI Defined in
region SequenceLocation 1..1 The region whose type is being defined SEPIO:0000279 RegionTypeStatement
statementOutcome @id 0..* Annotation about the type or importance of a region SEPIO:0000197 RegionTypeStatement
label string 0..1 A name given to the resource. RDFS:label Entity
description string 0..1 Description may include but is not limited to: an abstract, a table of contents, a graphical representation, or a free-text account of the resource. DC:description Entity
userLabelDictionary UserLabel 0..* An optional label defined by the user. Used for custom entities or to clarify the preferred user label on existing entities with non-preferred labels. SEPIO:0000422 Statement
outcomeQualifier string 0..1 Use “NOT” as the value of this property to assert that the statement is negated. SEPIO:0000346 Statement
evidenceLine EvidenceLine 0..* supporting evidence SEPIO:0000006 Statement
contribution Contribution 0..* The contributions (agent, time and role) made to this entity SEPIO:0000159 Statement
source string 0..* A string indicating the source of a Statement DC:source Statement

Instances

ID label description userLabelDictionary outcomeQualifier evidenceLine region statementOutcome

CGEX:RegTyp220

region does not have a known function.

NOT

CGEX:Loc438

SO:0002188

(functional region)

CGEX:RegTyp221

region is repeating.

CGEX:Loc438

SO:0000657

(repeat region )

CGEX:RegTyp225

The I-Band is a large region of repetitive Igg domains.

CGEX:Loc439

SO:0000657

(repeat region )

CGEX:RegTyp069

This is not a repreating region.

NOT

CGEX:Loc435

SO:0000657

(repeat region )

CGEX:RegTyp073

NP_056375.2[35..43] is not repeating.

NOT

CGEX:Loc436

SO:0000657

(repeat region )

CGEX:RegTyp077

NP_003915.2[241..260] is repeating.

CGEX:Loc437

SO:0000657

(repeat region )

CGEX:RegTyp040

This region is the catalytic (kinase) domain.

CGEX:Loc432

SO:0002188

(functional region)

CGEX:RegTyp043

This region is exon 15 in the transcript, and codes the serine-threonine-protein kinase catalytic domain.

CGEX:Loc433

SO:0002188

(functional region)

CGEX:RegTyp046

Region(NM_0001692[996..1012]) is a mutational hotspot.

CGEX:Loc434

SO:0002186

(mutational hotspot)

CGEX:RegTyp229

CGEX:Loc440

SO:0000657

(repeat region )