AlleleConservationStatement

A statement describing the observed correlation between transmission of a particular allele and a particular genetic condition, across multiple family pedigrees (i.e. the co-segregation of an allele and a condition as observed across multiple family pedigrees).

SEPIO:0000253
Descended from Statement

Scope and Usage

Attributes

Name Type Cardinality Description IRI Defined in
allele CanonicalAllele 1..1 The allele for which conservation values are given SEPIO:0000275 AlleleConservationStatement
algorithm string 0..1 Method or program used to calculate conservation SEPIO:0000130 AlleleConservationStatement
statementOutcome @id 1..1 The conservation classification from sequence ontology. SEPIO:0000197 AlleleConservationStatement
label string 0..1 A name given to the resource. RDFS:label Entity
description string 0..1 Description may include but is not limited to: an abstract, a table of contents, a graphical representation, or a free-text account of the resource. DC:description Entity
userLabelDictionary UserLabel 0..* An optional label defined by the user. Used for custom entities or to clarify the preferred user label on existing entities with non-preferred labels. SEPIO:0000422 Statement
outcomeQualifier string 0..1 Use “NOT” as the value of this property to assert that the statement is negated. SEPIO:0000346 Statement
evidenceLine EvidenceLine 0..* supporting evidence SEPIO:0000006 Statement
contribution Contribution 0..* The contributions (agent, time and role) made to this entity SEPIO:0000159 Statement
source string 0..* A string indicating the source of a Statement DC:source Statement

Instances

ID label description userLabelDictionary outcomeQualifier evidenceLine allele algorithm statementOutcome

CGEX:AllConserv071

CGEX:EvLn133

CAR:CA013536

phyloP

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv072

CGEX:EvLn134

CAR:CA013536

PhastCons

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv259

CGEX:EvLn135

CAR:CA501232

phyloP

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv260

CGEX:EvLn136

CAR:CA501232

PhastCons

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv263

CGEX:EvLn137

CAR:CA013536

phyloP

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv264

CGEX:EvLn138

CAR:CA013536

PhastCons

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv267

CGEX:EvLn139

CAR:CA177682

phyloP

SEPIO-CG:99017

(not conserved region)

CGEX:AllConserv268

CGEX:EvLn140

CAR:CA177682

PhastCons

SEPIO-CG:99017

(not conserved region)